source: doc/theses/thierry_delisle_PhD/thesis/thesis.tex @ e76fa30

ADTast-experimentalpthread-emulation
Last change on this file since e76fa30 was 847bb6f, checked in by Peter A. Buhr <pabuhr@…>, 23 months ago

proofread chapter text/io.tex, and updates in other chapaters

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1%======================================================================
2% University of Waterloo Thesis Template for LaTeX
3% Last Updated November, 2020
4% by Stephen Carr, IST Client Services,
5% University of Waterloo, 200 University Ave. W., Waterloo, Ontario, Canada
6% FOR ASSISTANCE, please send mail to request@uwaterloo.ca
7
8% DISCLAIMER
9% To the best of our knowledge, this template satisfies the current uWaterloo thesis requirements.
10% However, it is your responsibility to assure that you have met all requirements of the University and your particular department.
11
12% Many thanks for the feedback from many graduates who assisted the development of this template.
13% Also note that there are explanatory comments and tips throughout this template.
14%======================================================================
15% Some important notes on using this template and making it your own...
16
17% The University of Waterloo has required electronic thesis submission since October 2006.
18% See the uWaterloo thesis regulations at
19% https://uwaterloo.ca/graduate-studies/thesis.
20% This thesis template is geared towards generating a PDF version optimized for viewing on an electronic display, including hyperlinks within the PDF.
21
22% DON'T FORGET TO ADD YOUR OWN NAME AND TITLE in the "hyperref" package configuration below.
23% THIS INFORMATION GETS EMBEDDED IN THE PDF FINAL PDF DOCUMENT.
24% You can view the information if you view properties of the PDF document.
25
26% Many faculties/departments also require one or more printed copies.
27% This template attempts to satisfy both types of output.
28% See additional notes below.
29% It is based on the standard "book" document class which provides all necessary sectioning structures and allows multi-part theses.
30
31% If you are using this template in Overleaf (cloud-based collaboration service), then it is automatically processed and previewed for you as you edit.
32
33% For people who prefer to install their own LaTeX distributions on their own computers, and process the source files manually, the following notes provide the sequence of tasks:
34
35% E.g. to process a thesis called "mythesis.tex" based on this template, run:
36
37% pdflatex mythesis     -- first pass of the pdflatex processor
38% bibtex mythesis       -- generates bibliography from .bib data file(s)
39% makeindex         -- should be run only if an index is used
40% pdflatex mythesis     -- fixes numbering in cross-references, bibliographic references, glossaries, index, etc.
41% pdflatex mythesis     -- it takes a couple of passes to completely process all cross-references
42
43% If you use the recommended LaTeX editor, Texmaker, you would open the mythesis.tex file, then click the PDFLaTeX button. Then run BibTeX (under the Tools menu).
44% Then click the PDFLaTeX button two more times.
45% If you have an index as well,you'll need to run MakeIndex from the Tools menu as well, before running pdflatex
46% the last two times.
47
48% N.B. The "pdftex" program allows graphics in the following formats to be included with the "\includegraphics" command: PNG, PDF, JPEG, TIFF
49% Tip: Generate your figures and photos in the size you want them to appear in your thesis, rather than scaling them with \includegraphics options.
50% Tip: Any drawings you do should be in scalable vector graphic formats: SVG, PNG, WMF, EPS and then converted to PNG or PDF, so they are scalable in the final PDF as well.
51% Tip: Photographs should be cropped and compressed so as not to be too large.
52
53% To create a PDF output that is optimized for double-sided printing:
54% 1) comment-out the \documentclass statement in the preamble below, and un-comment the second \documentclass line.
55% 2) change the value assigned below to the boolean variable "PrintVersion" from " false" to "true".
56
57%======================================================================
58%   D O C U M E N T   P R E A M B L E
59% Specify the document class, default style attributes, and page dimensions, etc.
60% For hyperlinked PDF, suitable for viewing on a computer, use this:
61\documentclass[letterpaper,12pt,titlepage,oneside,final]{book}
62
63% For PDF, suitable for double-sided printing, change the PrintVersion variable below to "true" and use this \documentclass line instead of the one above:
64%\documentclass[letterpaper,12pt,titlepage,openright,twoside,final]{book}
65
66% Some LaTeX commands I define for my own nomenclature.
67% If you have to, it's easier to make changes to nomenclature once here than in a million places throughout your thesis!
68\newcommand{\package}[1]{\textbf{#1}} % package names in bold text
69\newcommand{\cmmd}[1]{\textbackslash\texttt{#1}} % command name in tt font
70\newcommand{\href}[1]{#1} % does nothing, but defines the command so the print-optimized version will ignore \href tags (redefined by hyperref pkg).
71%\newcommand{\texorpdfstring}[2]{#1} % does nothing, but defines the command
72% Anything defined here may be redefined by packages added below...
73
74% This package allows if-then-else control structures.
75\usepackage{ifthen}
76\newboolean{PrintVersion}
77\setboolean{PrintVersion}{false}
78% CHANGE THIS VALUE TO "true" as necessary, to improve printed results for hard copies by overriding some options of the hyperref package, called below.
79
80%\usepackage{nomencl} % For a nomenclature (optional; available from ctan.org)
81\usepackage{amsmath,amssymb,amstext} % Lots of math symbols and environments
82\usepackage[dvipsnames]{xcolor}
83\usepackage{graphicx} % For including graphics
84\usepackage{subcaption}
85\usepackage{comment} % Removes large sections of the document.
86
87% Hyperlinks make it very easy to navigate an electronic document.
88% In addition, this is where you should specify the thesis title and author as they appear in the properties of the PDF document.
89% Use the "hyperref" package
90% N.B. HYPERREF MUST BE THE LAST PACKAGE LOADED; ADD ADDITIONAL PKGS ABOVE
91\usepackage[pagebackref=false]{hyperref} % with basic options
92%\usepackage[pdftex,pagebackref=true]{hyperref}
93% N.B. pagebackref=true provides links back from the References to the body text. This can cause trouble for printing.
94\hypersetup{
95        plainpages=false,       % needed if Roman numbers in frontpages
96        unicode=false,          % non-Latin characters in Acrobat's bookmarks
97        pdftoolbar=true,        % show Acrobat's toolbar?
98        pdfmenubar=true,        % show Acrobat's menu?
99        pdffitwindow=false,     % window fit to page when opened
100        pdfstartview={FitH},    % fits the width of the page to the window
101        pdftitle={The Cforall Scheduler},    % title
102        pdfauthor={Thierry Delisle},    % author
103        pdfsubject={Cforall},   % subject
104        pdfkeywords={Cforall} {concurrency} {scheduling}, % list of keywords
105        pdfnewwindow=true,      % links in new window
106        colorlinks=true,        % false: boxed links; true: colored links
107        linkcolor=blue,         % color of internal links
108        citecolor=OliveGreen,   % color of links to bibliography
109        filecolor=magenta,      % color of file links
110        urlcolor=blue,           % color of external links
111        breaklinks=true
112}
113\ifthenelse{\boolean{PrintVersion}}{   % for improved print quality, change some hyperref options
114\hypersetup{    % override some previously defined hyperref options
115        citecolor=black,%
116        filecolor=black,%
117        linkcolor=black,%
118        urlcolor=black
119}}{} % end of ifthenelse (no else)
120
121\usepackage[automake,toc,abbreviations]{glossaries-extra} % Exception to the rule of hyperref being the last add-on package
122% If glossaries-extra is not in your LaTeX distribution, get it from CTAN (http://ctan.org/pkg/glossaries-extra),
123% although it's supposed to be in both the TeX Live and MikTeX distributions. There are also documentation and
124% installation instructions there.
125\makeatletter
126\newcommand*{\glsplainhyperlink}[2]{%
127  \colorlet{currenttext}{.}% store current text color
128  \colorlet{currentlink}{\@linkcolor}% store current link color
129  \hypersetup{linkcolor=currenttext}% set link color
130  \hyperlink{#1}{#2}%
131  \hypersetup{linkcolor=currentlink}% reset to default
132}
133\let\@glslink\glsplainhyperlink
134\makeatother
135
136\usepackage{csquotes}
137\usepackage{indentfirst} % as any self-respecting frenchman would
138
139% Setting up the page margins...
140\setlength{\textheight}{9in}
141\setlength{\topmargin}{-0.45in}
142\setlength{\headsep}{0.25in}
143% uWaterloo thesis requirements specify a minimum of 1 inch (72pt) margin at the
144% top, bottom, and outside page edges and a 1.125 in. (81pt) gutter margin (on binding side).
145% While this is not an issue for electronic viewing, a PDF may be printed, and so we have the same page layout for both printed and electronic versions, we leave the gutter margin in.
146% Set margins to minimum permitted by uWaterloo thesis regulations:
147\setlength{\marginparwidth}{0pt} % width of margin notes
148% N.B. If margin notes are used, you must adjust \textwidth, \marginparwidth
149% and \marginparsep so that the space left between the margin notes and page
150% edge is less than 15 mm (0.6 in.)
151\setlength{\marginparsep}{0pt} % width of space between body text and margin notes
152\setlength{\evensidemargin}{0.125in} % Adds 1/8 in. to binding side of all
153% even-numbered pages when the "twoside" printing option is selected
154\setlength{\oddsidemargin}{0.125in} % Adds 1/8 in. to the left of all pages when "oneside" printing is selected, and to the left of all odd-numbered pages when "twoside" printing is selected
155\setlength{\textwidth}{6.375in} % assuming US letter paper (8.5 in. x 11 in.) and side margins as above
156\raggedbottom
157
158% The following statement specifies the amount of space between paragraphs. Other reasonable specifications are \bigskipamount and \smallskipamount.
159\setlength{\parskip}{\medskipamount}
160
161% The following statement controls the line spacing.
162% The default spacing corresponds to good typographic conventions and only slight changes (e.g., perhaps "1.2"), if any, should be made.
163\renewcommand{\baselinestretch}{1} % this is the default line space setting
164
165% By default, each chapter will start on a recto (right-hand side) page.
166% We also force each section of the front pages to start on a recto page by inserting \cleardoublepage commands.
167% In many cases, this will require that the verso (left-hand) page be blank, and while it should be counted, a page number should not be printed.
168% The following statements ensure a page number is not printed on an otherwise blank verso page.
169\let\origdoublepage\cleardoublepage
170\newcommand{\clearemptydoublepage}{%
171  \clearpage{\pagestyle{empty}\origdoublepage}}
172\let\cleardoublepage\clearemptydoublepage
173
174\newcounter{cit}
175\newcounter{todo}
176
177% \newcommand{\cit}{\textsuperscript{[Citation Needed]}\xspace}
178% \newcommand{\TODO}{{\large\bf\color{red} TODO: }\xspace}
179
180\newcommand\cit[1]{\refstepcounter{cit}\textsuperscript{[Citation Needed]}\xspace\addcontentsline{cit}{subsection}{\thecit~#1}}%
181\newcommand\todo[1]{\refstepcounter{todo}{{\large\bf\color{red} TODO: }\xspace\color{red}{#1}}\addcontentsline{todo}{subsection}{\thetodo~#1}}%
182
183\makeatletter
184\newcommand\citname{cit}
185\newcommand\listcitname{List of missing citations}
186\newcommand\listofcits{%
187  \section*{\listcitname}\@starttoc{cit}}
188\makeatother
189
190\makeatletter
191\newcommand\todoname{todo}
192\newcommand\listtodoname{List of todos}
193\newcommand\listoftodos{%
194  \section*{\listtodoname}\@starttoc{todo}}
195\makeatother
196
197% cfa macros used in the document
198\input{common}
199\CFAStyle                                               % CFA code-style for all languages
200\lstset{language=CFA,basicstyle=\linespread{0.9}\tt}    % CFA default language
201
202% glossary of terms to use
203\input{glossary}
204\makeindex
205
206\newcommand\io{\glsxtrshort{io}\xspace}%
207\newcommand\at{\gls{at}\xspace}%
208\newcommand\ats{\glspl{at}\xspace}%
209\newcommand\Proc{\Pls{proc}\xspace}%
210\newcommand\proc{\gls{proc}\xspace}%
211\newcommand\procs{\glspl{proc}\xspace}%
212
213%======================================================================
214%   L O G I C A L    D O C U M E N T
215% The logical document contains the main content of your thesis.
216% Being a large document, it is a good idea to divide your thesis into several files, each one containing one chapter or other significant chunk of content, so you can easily shuffle things around later if desired.
217%======================================================================
218\begin{document}
219
220%----------------------------------------------------------------------
221% FRONT MATERIAL
222% title page,declaration, borrowers' page, abstract, acknowledgements,
223% dedication, table of contents, list of tables, list of figures, nomenclature, etc.
224%----------------------------------------------------------------------
225\input{text/front.tex}
226
227%----------------------------------------------------------------------
228% MAIN BODY
229% We suggest using a separate file for each chapter of your thesis.
230% Start each chapter file with the \chapter command.
231% Only use \documentclass or \begin{document} and \end{document} commands in this master document.
232% Tip: Putting each sentence on a new line is a way to simplify later editing.
233%----------------------------------------------------------------------
234
235\part{Introduction}
236\input{text/intro.tex}
237\input{text/existing.tex}
238\input{text/runtime.tex}
239\part{Design}
240\input{text/core.tex}
241\input{text/io.tex}
242\input{text/practice.tex}
243\part{Evaluation}
244\label{Evaluation}
245% \chapter{Theoretical and Existance Proofs}
246\input{text/eval_micro.tex}
247\input{text/eval_macro.tex}
248\part{Conclusion \& Annexes}
249
250%----------------------------------------------------------------------
251% END MATERIAL
252% Bibliography, Appendices, Index, etc.
253%----------------------------------------------------------------------
254
255% Bibliography
256
257% The following statement selects the style to use for references.
258% It controls the sort order of the entries in the bibliography and also the formatting for the in-text labels.
259\bibliographystyle{plain}
260% This specifies the location of the file containing the bibliographic information.
261% It assumes you're using BibTeX to manage your references (if not, why not?).
262\cleardoublepage % This is needed if the "book" document class is used, to place the anchor in the correct page, because the bibliography will start on its own page.
263% Use \clearpage instead if the document class uses the "oneside" argument
264\phantomsection  % With hyperref package, enables hyperlinking from the table of contents to bibliography
265% The following statement causes the title "References" to be used for the bibliography section:
266\renewcommand*{\bibname}{References}
267
268% Add the References to the Table of Contents
269\addcontentsline{toc}{chapter}{\textbf{References}}
270
271\bibliography{local,pl}
272% Tip: You can create multiple .bib files to organize your references.
273% Just list them all in the \bibliogaphy command, separated by commas (no spaces).
274
275% The following statement causes the specified references to be added to the bibliography even if they were not cited in the text.
276% The asterisk is a wildcard that causes all entries in the bibliographic database to be included (optional).
277% \nocite{*}
278%----------------------------------------------------------------------
279
280% Appendices
281
282% The \appendix statement indicates the beginning of the appendices.
283\appendix
284% Add an un-numbered title page before the appendices and a line in the Table of Contents
285\chapter*{APPENDICES}
286\addcontentsline{toc}{chapter}{APPENDICES}
287% Appendices are just more chapters, with different labeling (letters instead of numbers).
288%======================================================================
289\chapter[PDF Plots From Matlab]{Matlab Code for Making a PDF Plot}
290\label{AppendixA}
291% Tip 4: Example of how to get a shorter chapter title for the Table of Contents
292%======================================================================
293\section{Using the GUI}
294Properties of Matab plots can be adjusted from the plot window via a graphical interface. Under the Desktop menu in the Figure window, select the Property Editor. You may also want to check the Plot Browser and Figure Palette for more tools. To adjust properties of the axes, look under the Edit menu and select Axes Properties.
295
296To set the figure size and to save as PDF or other file formats, click the Export Setup button in the figure Property Editor.
297
298\section{From the Command Line}
299All figure properties can also be manipulated from the command line. Here's an example:
300\begin{verbatim}
301x=[0:0.1:pi];
302hold on % Plot multiple traces on one figure
303plot(x,sin(x))
304plot(x,cos(x),'--r')
305plot(x,tan(x),'.-g')
306title('Some Trig Functions Over 0 to \pi') % Note LaTeX markup!
307legend('{\it sin}(x)','{\it cos}(x)','{\it tan}(x)')
308hold off
309set(gca,'Ylim',[-3 3]) % Adjust Y limits of "current axes"
310set(gcf,'Units','inches') % Set figure size units of "current figure"
311set(gcf,'Position',[0,0,6,4]) % Set figure width (6 in.) and height (4 in.)
312cd n:\thesis\plots % Select where to save
313print -dpdf plot.pdf % Save as PDF
314\end{verbatim}
315
316% GLOSSARIES (Lists of definitions, abbreviations, symbols, etc. provided by the glossaries-extra package)
317% -----------------------------
318\printglossary
319\cleardoublepage
320
321% Index
322% -----------------------------
323%\input{thesis.ind}                             % index
324
325\phantomsection         % allows hyperref to link to the correct page
326
327%----------------------------------------------------------------------
328\end{document} % end of logical document
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