source: doc/theses/colby_parsons_MMAth/thesis.tex @ 8599415

ast-experimental
Last change on this file since 8599415 was 8599415, checked in by Peter A. Buhr <pabuhr@…>, 13 months ago

add breaklinks=true to hyperref

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1%======================================================================
2% University of Waterloo Thesis Template for LaTeX
3% Last Updated August 2022
4% by IST Client Services,
5% University of Waterloo, 200 University Ave. W., Waterloo, Ontario, Canada
6% FOR ASSISTANCE, please send mail to helpdesk@uwaterloo.ca
7
8% DISCLAIMER
9% To the best of our knowledge, this template satisfies the current uWaterloo thesis requirements.
10% However, it is your responsibility to assure that you have met all requirements of the University and your particular department.
11
12% Many thanks for the feedback from many graduates who assisted the development of this template.
13% Also note that there are explanatory comments and tips throughout this template.
14%======================================================================
15% Some important notes on using this template and making it your own...
16
17% The University of Waterloo has required electronic thesis submission since October 2006.
18% See the uWaterloo thesis regulations at
19% https://uwaterloo.ca/graduate-studies/thesis.
20% This thesis template is geared towards generating a PDF version optimized for viewing on an electronic display, including hyperlinks within the PDF.
21
22% DON'T FORGET TO ADD YOUR OWN NAME AND TITLE in the "hyperref" package configuration below.
23% Search for: PDFTITLE, PDFAUTHOR, PDFSUBJECT, and PDFKEYWORDS.
24% THIS INFORMATION GETS EMBEDDED IN THE FINAL PDF DOCUMENT.
25% You can view the information if you view properties of the PDF document.
26
27% Many faculties/departments also require one or more printed copies.
28% This template attempts to satisfy both types of output.
29% See additional notes below.
30% It is based on the standard "book" document class which provides all necessary sectioning structures and allows multi-part theses.
31
32% If you are using this template in Overleaf (cloud-based collaboration service), then it is automatically processed and previewed for you as you edit.
33
34% For people who prefer to install their own LaTeX distributions on their own computers, and process the source files manually, the following notes provide the sequence of tasks:
35 
36% E.g. to process a thesis called "mythesis.tex" based on this template, run:
37
38% pdflatex mythesis     -- first pass of the pdflatex processor
39% bibtex mythesis       -- generates bibliography from .bib data file(s)
40% makeindex         -- should be run only if an index is used
41% pdflatex mythesis     -- fixes numbering in cross-references, bibliographic references, glossaries, index, etc.
42% pdflatex mythesis     -- it takes a couple of passes to completely process all cross-references
43
44% If you use the recommended LaTeX editor, Texmaker, you would open the mythesis.tex file, then click the PDFLaTeX button. Then run BibTeX (under the Tools menu).
45% Then click the PDFLaTeX button two more times.
46% If you have an index as well,you'll need to run MakeIndex from the Tools menu as well, before running pdflatex
47% the last two times.
48
49% N.B. The "pdftex" program allows graphics in the following formats to be included with the "\includegraphics" command: PNG, PDF, JPEG, TIFF
50% Tip: Generate your figures and photos in the size you want them to appear in your thesis, rather than scaling them with \includegraphics options.
51% Tip: Any drawings you do should be in scalable vector graphic formats: SVG, PNG, WMF, EPS and then converted to PNG or PDF, so they are scalable in the final PDF as well.
52% Tip: Photographs should be cropped and compressed so as not to be too large.
53
54% To create a PDF output that is optimized for double-sided printing:
55% 1) comment-out the \documentclass statement in the preamble below, and un-comment the second \documentclass line.
56% 2) change the value assigned below to the boolean variable "PrintVersion" from " false" to "true".
57
58%======================================================================
59%   D O C U M E N T   P R E A M B L E
60% Specify the document class, default style attributes, and page dimensions, etc.
61% For hyperlinked PDF, suitable for viewing on a computer, use this:
62\documentclass[letterpaper,12pt,titlepage,oneside,final]{book}
63 
64% For PDF, suitable for double-sided printing, change the PrintVersion variable below to "true" and use this \documentclass line instead of the one above:
65%\documentclass[letterpaper,12pt,titlepage,openright,twoside,final]{book}
66
67% Some LaTeX commands I define for my own nomenclature.
68% If you have to, it's easier to make changes to nomenclature once here than in a million places throughout your thesis!
69\newcommand{\package}[1]{\textbf{#1}} % package names in bold text
70\newcommand{\cmmd}[1]{\textbackslash\texttt{#1}} % command name in tt font
71\newcommand{\href}[1]{#1} % does nothing, but defines the command so the print-optimized version will ignore \href tags (redefined by hyperref pkg).
72%\newcommand{\texorpdfstring}[2]{#1} % does nothing, but defines the command
73% Anything defined here may be redefined by packages added below...
74
75% This package allows if-then-else control structures.
76\usepackage{ifthen}
77\newboolean{PrintVersion}
78\setboolean{PrintVersion}{false}
79% CHANGE THIS VALUE TO "true" as necessary, to improve printed results for hard copies by overriding some options of the hyperref package, called below.
80
81%\usepackage{nomencl} % For a nomenclature (optional; available from ctan.org)
82\usepackage{amsmath,amssymb,amstext} % Lots of math symbols and environments
83
84\usepackage{tikz} % for diagrams and figures
85\def\checkmark{\tikz\fill[scale=0.4](0,.35) -- (.25,0) -- (1,.7) -- (.25,.15) -- cycle;}
86\usepackage{fullpage,times,comment}
87\usepackage{textcomp}
88\usepackage{graphicx}
89\usepackage{tabularx}
90\usepackage[labelformat=simple,aboveskip=0pt,farskip=0pt,font=normalsize]{subfig}
91\renewcommand\thesubfigure{(\alph{subfigure})}
92\input{style}
93
94% Hyperlinks make it very easy to navigate an electronic document.
95% In addition, this is where you should specify the thesis title and author as they appear in the properties of the PDF document.
96% Use the "hyperref" package
97% N.B. HYPERREF MUST BE THE LAST PACKAGE LOADED; ADD ADDITIONAL PKGS ABOVE
98\usepackage[dvips,pagebackref=false]{hyperref} % with basic options
99\hypersetup{
100    plainpages=false,       % needed if Roman numbers in frontpages
101    unicode=false,          % non-Latin characters in Acrobat's bookmarks
102    pdftoolbar=true,        % show Acrobat's toolbar?
103    pdfmenubar=true,        % show Acrobat's menu?
104    pdffitwindow=false,     % window fit to page when opened
105    pdfstartview={FitH},    % fits the width of the page to the window
106    pdftitle={High Level Concurrency in \CFA},
107    pdfauthor={Colby Parsons},
108    pdfsubject={Cforall},
109%    pdfkeywords={keyword1} {key2} {key3}, % list of keywords, and uncomment this line if desired
110    pdfnewwindow=true,      % links in new window
111    colorlinks=true,        % false: boxed links; true: colored links
112    linkcolor=blue,         % color of internal links
113    citecolor=blue,         % color of links to bibliography
114    filecolor=magenta,      % color of file links
115    urlcolor=cyan,          % color of external links
116    breaklinks=true
117}
118\ifthenelse{\boolean{PrintVersion}}{   % for improved print quality, change some hyperref options
119\hypersetup{    % override some previously defined hyperref options
120%    colorlinks,%
121    citecolor=black,%
122    filecolor=black,%
123    linkcolor=black,%
124    urlcolor=black}
125}{} % end of ifthenelse (no else)
126
127% \usepackage[acronym]{glossaries}
128\usepackage[automake,toc,abbreviations]{glossaries-extra} % Exception to the rule of hyperref being the last add-on package
129\renewcommand*{\glstextformat}[1]{\textcolor{black}{#1}}
130% If glossaries-extra is not in your LaTeX distribution, get it from CTAN (http://ctan.org/pkg/glossaries-extra),
131% although it's supposed to be in both the TeX Live and MikTeX distributions. There are also documentation and
132% installation instructions there.
133
134% Setting up the page margins...
135% uWaterloo thesis requirements specify a minimum of 1 inch (72pt) margin at the
136% top, bottom, and outside page edges and a 1.125 in. (81pt) gutter margin (on binding side).
137% While this is not an issue for electronic viewing, a PDF may be printed, and so we have the same page layout for both printed and electronic versions, we leave the gutter margin in.
138% Set margins to minimum permitted by uWaterloo thesis regulations:
139\setlength{\marginparwidth}{0pt} % width of margin notes
140% N.B. If margin notes are used, you must adjust \textwidth, \marginparwidth
141% and \marginparsep so that the space left between the margin notes and page
142% edge is less than 15 mm (0.6 in.)
143\setlength{\marginparsep}{0pt} % width of space between body text and margin notes
144\setlength{\evensidemargin}{0.125in} % Adds 1/8 in. to binding side of all
145% even-numbered pages when the "twoside" printing option is selected
146\setlength{\oddsidemargin}{0.125in} % Adds 1/8 in. to the left of all pages when "oneside" printing is selected, and to the left of all odd-numbered pages when "twoside" printing is selected
147\setlength{\textwidth}{6.375in} % assuming US letter paper (8.5 in. x 11 in.) and side margins as above
148\raggedbottom
149
150% The following statement specifies the amount of space between paragraphs. Other reasonable specifications are \bigskipamount and \smallskipamount.
151\setlength{\parskip}{\medskipamount}
152
153% The following statement controls the line spacing. 
154% The default spacing corresponds to good typographic conventions and only slight changes (e.g., perhaps "1.2"), if any, should be made.
155\renewcommand{\baselinestretch}{1} % this is the default line space setting
156
157% By default, each chapter will start on a recto (right-hand side) page.
158% We also force each section of the front pages to start on a recto page by inserting \cleardoublepage commands.
159% In many cases, this will require that the verso (left-hand) page be blank, and while it should be counted, a page number should not be printed.
160% The following statements ensure a page number is not printed on an otherwise blank verso page.
161\let\origdoublepage\cleardoublepage
162\newcommand{\clearemptydoublepage}{%
163  \clearpage{\pagestyle{empty}\origdoublepage}}
164\let\cleardoublepage\clearemptydoublepage
165
166% Define Glossary terms (This is properly done here, in the preamble and could also be \input{} from a separate file...)
167\input{glossary}
168\makeglossaries
169
170%======================================================================
171%   L O G I C A L    D O C U M E N T
172% The logical document contains the main content of your thesis.
173% Being a large document, it is a good idea to divide your thesis into several files, each one containing one chapter or other significant chunk of content, so you can easily shuffle things around later if desired.
174%======================================================================
175\begin{document}
176\newtheorem{theorem}{Theorem}
177
178%----------------------------------------------------------------------
179% FRONT MATERIAL
180% title page,declaration, borrowers' page, abstract, acknowledgements,
181% dedication, table of contents, list of tables, list of figures, nomenclature, etc.
182%----------------------------------------------------------------------
183\input{frontpgs} 
184
185%----------------------------------------------------------------------
186% MAIN BODY
187% We suggest using a separate file for each chapter of your thesis.
188% Start each chapter file with the \chapter command.
189% Only use \documentclass or \begin{document} and \end{document} commands in this master document.
190% Tip: Putting each sentence on a new line is a way to simplify later editing.
191%----------------------------------------------------------------------
192\input{intro}
193
194\input{CFA_intro}
195
196\input{CFA_concurrency}
197
198\input{mutex_stmt}
199
200\input{channels}
201
202\input{actors}
203
204\input{waituntil}
205
206%----------------------------------------------------------------------
207% END MATERIAL
208% Bibliography, Appendices, Index, etc.
209%----------------------------------------------------------------------
210
211% Bibliography
212
213% The following statement selects the style to use for references. 
214% It controls the sort order of the entries in the bibliography and also the formatting for the in-text labels.
215\bibliographystyle{plain}
216% This specifies the location of the file containing the bibliographic information. 
217% It assumes you're using BibTeX to manage your references (if not, why not?).
218\cleardoublepage % This is needed if the "book" document class is used, to place the anchor in the correct page, because the bibliography will start on its own page.
219% Use \clearpage instead if the document class uses the "oneside" argument
220\phantomsection  % With hyperref package, enables hyperlinking from the table of contents to bibliography             
221% The following statement causes the title "References" to be used for the bibliography section:
222\renewcommand*{\bibname}{References}
223
224% Add the References to the Table of Contents
225\addcontentsline{toc}{chapter}{\textbf{References}}
226
227\bibliography{pl,local}
228% Tip: You can create multiple .bib files to organize your references.
229% Just list them all in the \bibliogaphy command, separated by commas (no spaces).
230
231% The following statement causes the specified references to be added to the bibliography even if they were not cited in the text.
232% The asterisk is a wildcard that causes all entries in the bibliographic database to be included (optional).
233% \nocite{*}
234%----------------------------------------------------------------------
235
236% Appendices
237
238% The \appendix statement indicates the beginning of the appendices.
239% \appendix
240% % Add an un-numbered title page before the appendices and a line in the Table of Contents
241% \chapter*{APPENDICES}
242% \addcontentsline{toc}{chapter}{APPENDICES}
243% % Appendices are just more chapters, with different labeling (letters instead of numbers).
244% \input{appendix-matlab_plots.tex}
245
246% GLOSSARIES (Lists of definitions, abbreviations, symbols, etc. provided by the glossaries-extra package)
247% -----------------------------
248\printglossary
249\cleardoublepage
250\phantomsection         % allows hyperref to link to the correct page
251
252%----------------------------------------------------------------------
253\end{document} % end of logical document
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