Index: Jenkinsfile
===================================================================
--- Jenkinsfile	(revision a8a761247e7dbc23a53eb86663312906a9f43b3b)
+++ Jenkinsfile	(revision 02559df1767200115484b32e7d7706404cb6e01c)
@@ -266,5 +266,5 @@
 			//Use the current directory as the installation target so nothing escapes the sandbox
 			//Also specify the compiler by hand
-			sh "../configure CXX=${compiler.cpp_cc} ${architecture} --with-backend-compiler=${compiler.cfa_cc} --prefix=${install_dir} --enable-silent-rules --quiet --disable-dependency-tracking"
+			sh "../configure CXX=${compiler.cpp_cc} ${architecture} --with-backend-compiler=${compiler.cfa_cc} --prefix=${install_dir} --enable-silent-rules --quiet"
 
 			//Compile the project
Index: src/tests/test.py
===================================================================
--- src/tests/test.py	(revision a8a761247e7dbc23a53eb86663312906a9f43b3b)
+++ src/tests/test.py	(revision 02559df1767200115484b32e7d7706404cb6e01c)
@@ -219,4 +219,7 @@
 	make('clean', redirects = '> /dev/null 2>&1')
 
+	# automake doesn't clean the dependencies so do it by hand
+	sh("find %s -type d -name .deps -delete" % settings.BUIDDIR)
+
 	# create the executor for our jobs and handle the signal properly
 	pool = setupPool(jobs)