source: doc/theses/mike_brooks_MMath/uw-ethesis.tex @ 82b9e956

ADTast-experimentalpthread-emulation
Last change on this file since 82b9e956 was 37e9c1d, checked in by Peter A. Buhr <pabuhr@…>, 3 years ago

harmonize latex macros and Makefiles, small wording correction

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1%======================================================================
2% University of Waterloo Thesis Template for LaTeX
3% Last Updated November, 2020
4% by Stephen Carr, IST Client Services,
5% University of Waterloo, 200 University Ave. W., Waterloo, Ontario, Canada
6% FOR ASSISTANCE, please send mail to request@uwaterloo.ca
7
8% DISCLAIMER
9% To the best of our knowledge, this template satisfies the current uWaterloo thesis requirements.
10% However, it is your responsibility to assure that you have met all requirements of the University and your particular department.
11
12% Many thanks for the feedback from many graduates who assisted the development of this template.
13% Also note that there are explanatory comments and tips throughout this template.
14%======================================================================
15% Some important notes on using this template and making it your own...
16
17% The University of Waterloo has required electronic thesis submission since October 2006.
18% See the uWaterloo thesis regulations at
19% https://uwaterloo.ca/graduate-studies/thesis.
20% This thesis template is geared towards generating a PDF version optimized for viewing on an electronic display, including hyperlinks within the PDF.
21
22% DON'T FORGET TO ADD YOUR OWN NAME AND TITLE in the "hyperref" package configuration below.
23% THIS INFORMATION GETS EMBEDDED IN THE PDF FINAL PDF DOCUMENT.
24% You can view the information if you view properties of the PDF document.
25
26% Many faculties/departments also require one or more printed copies.
27% This template attempts to satisfy both types of output.
28% See additional notes below.
29% It is based on the standard "book" document class which provides all necessary sectioning structures and allows multi-part theses.
30
31% If you are using this template in Overleaf (cloud-based collaboration service), then it is automatically processed and previewed for you as you edit.
32
33% For people who prefer to install their own LaTeX distributions on their own computers, and process the source files manually, the following notes provide the sequence of tasks:
34
35% E.g. to process a thesis called "mythesis.tex" based on this template, run:
36
37% pdflatex mythesis     -- first pass of the pdflatex processor
38% bibtex mythesis       -- generates bibliography from .bib data file(s)
39% makeindex         -- should be run only if an index is used
40% pdflatex mythesis     -- fixes numbering in cross-references, bibliographic references, glossaries, index, etc.
41% pdflatex mythesis     -- it takes a couple of passes to completely process all cross-references
42
43% If you use the recommended LaTeX editor, Texmaker, you would open the mythesis.tex file, then click the PDFLaTeX button. Then run BibTeX (under the Tools menu).
44% Then click the PDFLaTeX button two more times.
45% If you have an index as well,you'll need to run MakeIndex from the Tools menu as well, before running pdflatex
46% the last two times.
47
48% N.B. The "pdftex" program allows graphics in the following formats to be included with the "\includegraphics" command: PNG, PDF, JPEG, TIFF
49% Tip: Generate your figures and photos in the size you want them to appear in your thesis, rather than scaling them with \includegraphics options.
50% Tip: Any drawings you do should be in scalable vector graphic formats: SVG, PNG, WMF, EPS and then converted to PNG or PDF, so they are scalable in the final PDF as well.
51% Tip: Photographs should be cropped and compressed so as not to be too large.
52
53% To create a PDF output that is optimized for double-sided printing:
54% 1) comment-out the \documentclass statement in the preamble below, and un-comment the second \documentclass line.
55% 2) change the value assigned below to the boolean variable "PrintVersion" from " false" to "true".
56
57%======================================================================
58%   D O C U M E N T   P R E A M B L E
59% Specify the document class, default style attributes, and page dimensions, etc.
60% For hyperlinked PDF, suitable for viewing on a computer, use this:
61\documentclass[letterpaper,12pt,titlepage,oneside,final]{book}
62\usepackage[T1]{fontenc}        % Latin-1 => 256-bit characters, => | not dash, <> not Spanish question marks
63
64% For PDF, suitable for double-sided printing, change the PrintVersion variable below to "true" and use this \documentclass line instead of the one above:
65%\documentclass[letterpaper,12pt,titlepage,openright,twoside,final]{book}
66
67% Some LaTeX commands I define for my own nomenclature.
68% If you have to, it's easier to make changes to nomenclature once here than in a million places throughout your thesis!
69\newcommand{\package}[1]{\textbf{#1}} % package names in bold text
70\newcommand{\cmmd}[1]{\textbackslash\texttt{#1}} % command name in tt font
71\newcommand{\href}[1]{#1} % does nothing, but defines the command so the print-optimized version will ignore \href tags (redefined by hyperref pkg).
72%\newcommand{\texorpdfstring}[2]{#1} % does nothing, but defines the command
73% Anything defined here may be redefined by packages added below...
74
75% This package allows if-then-else control structures.
76\usepackage{ifthen}
77\newboolean{PrintVersion}
78\setboolean{PrintVersion}{false}
79% CHANGE THIS VALUE TO "true" as necessary, to improve printed results for hard copies by overriding some options of the hyperref package, called below.
80
81%\usepackage{nomencl} % For a nomenclature (optional; available from ctan.org)
82\usepackage{amsmath,amssymb,amstext} % Lots of math symbols and environments
83\usepackage{xcolor}
84\usepackage{epic,eepic}
85\usepackage{graphicx}
86\graphicspath{{pictures/}} % picture directory
87\usepackage{comment} % Removes large sections of the document.
88\usepackage{tabularx}
89\usepackage{subfigure}
90
91\usepackage{algorithm}
92\usepackage{algpseudocode}
93
94% Hyperlinks make it very easy to navigate an electronic document.
95% In addition, this is where you should specify the thesis title and author as they appear in the properties of the PDF document.
96% Use the "hyperref" package
97% N.B. HYPERREF MUST BE THE LAST PACKAGE LOADED; ADD ADDITIONAL PKGS ABOVE
98\usepackage[pagebackref=true]{hyperref} % with basic options
99%\usepackage[pdftex,pagebackref=true]{hyperref}
100% N.B. pagebackref=true provides links back from the References to the body text. This can cause trouble for printing.
101\hypersetup{
102    plainpages=false,       % needed if Roman numbers in frontpages
103    unicode=false,          % non-Latin characters in Acrobat's bookmarks
104    pdftoolbar=true,        % show Acrobat's toolbar?
105    pdfmenubar=true,        % show Acrobat's menu?
106    pdffitwindow=false,     % window fit to page when opened
107    pdfstartview={FitH},    % fits the width of the page to the window
108    pdftitle={Cforall Memory Allocation}, % title: CHANGE THIS TEXT!
109    pdfauthor={Mubeen Zulfiqar},    % author: CHANGE THIS TEXT! and uncomment this line
110    pdfsubject={Cforall}% subject: CHANGE THIS TEXT! and uncomment this line
111    pdfkeywords={Cforall} {storage allocation} {C language}, % optional list of keywords
112    pdfnewwindow=true,      % links in new window
113    colorlinks=true,        % false: boxed links; true: colored links
114    linkcolor=blue,         % color of internal links
115    citecolor=blue,        % color of links to bibliography
116    filecolor=magenta,      % color of file links
117    urlcolor=blue           % color of external links
118}
119\ifthenelse{\boolean{PrintVersion}}{   % for improved print quality, change some hyperref options
120\hypersetup{    % override some previously defined hyperref options
121    citecolor=black,%
122    filecolor=black,%
123    linkcolor=black,%
124    urlcolor=black
125}}{} % end of ifthenelse (no else)
126
127%\usepackage[automake,toc,abbreviations]{glossaries-extra} % Exception to the rule of hyperref being the last add-on package
128% If glossaries-extra is not in your LaTeX distribution, get it from CTAN (http://ctan.org/pkg/glossaries-extra),
129% although it's supposed to be in both the TeX Live and MikTeX distributions. There are also documentation and
130% installation instructions there.
131
132% Setting up the page margins...
133\setlength{\textheight}{9in}
134\setlength{\topmargin}{-0.45in}
135\setlength{\headsep}{0.25in}
136% uWaterloo thesis requirements specify a minimum of 1 inch (72pt) margin at the
137% top, bottom, and outside page edges and a 1.125 in. (81pt) gutter margin (on binding side).
138% While this is not an issue for electronic viewing, a PDF may be printed, and so we have the same page layout for both printed and electronic versions, we leave the gutter margin in.
139% Set margins to minimum permitted by uWaterloo thesis regulations:
140\setlength{\marginparwidth}{0pt} % width of margin notes
141% N.B. If margin notes are used, you must adjust \textwidth, \marginparwidth
142% and \marginparsep so that the space left between the margin notes and page
143% edge is less than 15 mm (0.6 in.)
144\setlength{\marginparsep}{0pt} % width of space between body text and margin notes
145\setlength{\evensidemargin}{0.125in} % Adds 1/8 in. to binding side of all
146% even-numbered pages when the "twoside" printing option is selected
147\setlength{\oddsidemargin}{0.125in} % Adds 1/8 in. to the left of all pages when "oneside" printing is selected, and to the left of all odd-numbered pages when "twoside" printing is selected
148\setlength{\textwidth}{6.375in} % assuming US letter paper (8.5 in. x 11 in.) and side margins as above
149\raggedbottom
150
151% The following statement specifies the amount of space between paragraphs. Other reasonable specifications are \bigskipamount and \smallskipamount.
152\setlength{\parskip}{\medskipamount}
153
154% The following statement controls the line spacing.
155% The default spacing corresponds to good typographic conventions and only slight changes (e.g., perhaps "1.2"), if any, should be made.
156\renewcommand{\baselinestretch}{1} % this is the default line space setting
157
158% By default, each chapter will start on a recto (right-hand side) page.
159% We also force each section of the front pages to start on a recto page by inserting \cleardoublepage commands.
160% In many cases, this will require that the verso (left-hand) page be blank, and while it should be counted, a page number should not be printed.
161% The following statements ensure a page number is not printed on an otherwise blank verso page.
162\let\origdoublepage\cleardoublepage
163\newcommand{\clearemptydoublepage}{%
164  \clearpage{\pagestyle{empty}\origdoublepage}}
165\let\cleardoublepage\clearemptydoublepage
166
167% Define Glossary terms (This is properly done here, in the preamble and
168% could also be \input{} from a separate file...)
169%\input{glossaries}
170%\makeglossaries
171
172% cfa macros used in the document
173\input{common}
174%\usepackageinput{common}
175\CFAStyle                                               % CFA code-style
176\lstset{language=CFA}                                   % default language
177\lstset{basicstyle=\linespread{0.9}\tt}                 % CFA typewriter font
178\lstset{inputpath={programs}}
179\newcommand{\PAB}[1]{{\color{red}PAB: #1}}
180
181%======================================================================
182%   L O G I C A L    D O C U M E N T
183% The logical document contains the main content of your thesis.
184% Being a large document, it is a good idea to divide your thesis into several files, each one containing one chapter or other significant chunk of content, so you can easily shuffle things around later if desired.
185%======================================================================
186\begin{document}
187
188%----------------------------------------------------------------------
189% FRONT MATERIAL
190% title page,declaration, borrowers' page, abstract, acknowledgements,
191% dedication, table of contents, list of tables, list of figures, nomenclature, etc.
192%----------------------------------------------------------------------
193\input{uw-ethesis-frontpgs}
194
195%----------------------------------------------------------------------
196% MAIN BODY
197% We suggest using a separate file for each chapter of your thesis.
198% Start each chapter file with the \chapter command.
199% Only use \documentclass or \begin{document} and \end{document} commands in this master document.
200% Tip: Putting each sentence on a new line is a way to simplify later editing.
201%----------------------------------------------------------------------
202\begin{sloppypar}
203
204\input{intro}
205\input{background}
206\input{array}
207\input{string}
208\input{conclusion}
209
210\end{sloppypar}
211
212%----------------------------------------------------------------------
213% END MATERIAL
214% Bibliography, Appendices, Index, etc.
215%----------------------------------------------------------------------
216
217% Bibliography
218
219% The following statement selects the style to use for references.
220% It controls the sort order of the entries in the bibliography and also the formatting for the in-text labels.
221\bibliographystyle{plain}
222% This specifies the location of the file containing the bibliographic information.
223% It assumes you're using BibTeX to manage your references (if not, why not?).
224\cleardoublepage % This is needed if the "book" document class is used, to place the anchor in the correct page, because the bibliography will start on its own page.
225% Use \clearpage instead if the document class uses the "oneside" argument
226\phantomsection  % With hyperref package, enables hyperlinking from the table of contents to bibliography
227% The following statement causes the title "References" to be used for the bibliography section:
228\renewcommand*{\bibname}{References}
229
230% Add the References to the Table of Contents
231\addcontentsline{toc}{chapter}{\textbf{References}}
232
233\bibliography{pl,uw-ethesis}
234% Tip: You can create multiple .bib files to organize your references.
235% Just list them all in the \bibliogaphy command, separated by commas (no spaces).
236
237% The following statement causes the specified references to be added to the bibliography even if they were not cited in the text.
238% The asterisk is a wildcard that causes all entries in the bibliographic database to be included (optional).
239% \nocite{*}
240%----------------------------------------------------------------------
241
242% Appendices
243
244% The \appendix statement indicates the beginning of the appendices.
245\appendix
246% Add an un-numbered title page before the appendices and a line in the Table of Contents
247% \chapter*{APPENDICES}
248% \addcontentsline{toc}{chapter}{APPENDICES}
249% Appendices are just more chapters, with different labeling (letters instead of numbers).
250% \input{appendix-matlab_plots.tex}
251
252% GLOSSARIES (Lists of definitions, abbreviations, symbols, etc.
253% provided by the glossaries-extra package)
254% -----------------------------
255%\printglossaries
256%\cleardoublepage
257%\phantomsection                % allows hyperref to link to the correct page
258
259%----------------------------------------------------------------------
260\end{document} % end of logical document
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